PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG009270.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 92aa    MW: 10266.8 Da    PI: 11.4492
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG009270.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.95.8e-0614521255
                      HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  TRIDC3AG009270.2 14 RKEKLGDRIAALQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 52
                      7788999**********98.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
PATNNNILPS FKVRKEKLGD RIAALQQLVS PFGKTDTASV LMEAIGYIKF LQDQVETLSG  60
PYMRSAKHKK ARTTQQRVRA VRHRRSEGGS KG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-31bHLH family protein