PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG009270.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 378aa    MW: 40158.6 Da    PI: 7.5625
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG009270.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.7e-053143521255
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  TRIDC3AG009270.3 314 RKEKLGDRIAALQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 352
                       7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MMASSSSSSD LSADHRLLQD DLPWPSPSSM PPPLAPALHH AVGGNHHQWS QPLMLEQLSS  60
DELEALLSAQ VHQHHSHSQL LAAPLTANPH HQLSSLLMMQ ELGFQWSSSC GAADGDSNET  120
AQDEVKEDAK LPGPLVLPRP SSSSSIAYDD DMAVDVLPSV NVSRLQKIPC PVAAGPFGGR  180
AEATLEMLAS AKFCKSLLGC SQASSTVLLH NGGGTAPLLG MGGHHVAYGP PPPVHRLQGP  240
SSILHTYNKM GVPAALLSGN GSALQAATGR SSGGGGLHDE QQLQMLEVSS KKKPRLLHSR  300
PATNNNILPS FKVRKEKLGD RIAALQQLVS PFGKTDTASV LMEAIGYIKF LQDQVETLSG  360
PYMRSAKHKK ARTTQQRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.16e-30bHLH family protein