PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG011010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 208aa    MW: 22015.8 Da    PI: 8.4078
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG011010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26092.26.3e-294107199
            DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                       +C++C+vlr++C ++C+++p++     p++q++++ +++k++G++ +l+ll+a +   r+++++sl+yeA+ r+ +PvyG+vg+++++q+  +
  TRIDC3AG011010.1   4 SCNGCRVLRKGCGEGCTIRPCLewirsPDAQANATVFLAKFYGRAGLLNLLAAEDAALRPALFRSLLYEACGRMVNPVYGSVGLLWSGQWGAC 96 
                       6****************************************************99999*********************************** PP

            DUF260  89 qlkaelallke 99 
                       q+++e++l ++
  TRIDC3AG011010.1  97 QAAVEAVLKGR 107
                       ****9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MRMSCNGCRV LRKGCGEGCT IRPCLEWIRS PDAQANATVF LAKFYGRAGL LNLLAAEDAA  60
LRPALFRSLL YEACGRMVNP VYGSVGLLWS GQWGACQAAV EAVLKGRPIV RVTSDAPLTA  120
CDIRHVAKAD RPAAAADTPL GVSRAGRTGF KRASSSTAKS KSRTSSGAKR DDGLDQAPSH  180
EESAGSHDHG SHVEDDGMAV EQTRGEES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.12e-59LBD family protein