PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG011980.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 242aa    MW: 26794.9 Da    PI: 9.636
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG011980.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.3e-1864113255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa+a++ a+++++g
  TRIDC3AG011980.5  64 AYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGSFPTAVEAARAYDDAARAMYG 113
                       59****999.**********8...2.359***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
GARLRKKKVR RRSTGPDSVA ETIKKWKEEN QKLQQENGSR KAPAKGSKKG CMAGKGGPEN  60
SNCAYRGVRQ RTWGKWVAEI REPNRGNRLW LGSFPTAVEA ARAYDDAARA MYGAKARVNF  120
SEQSPDANSG CTLSPPSLIS NGPTAALRRS DAKDESESAG TVARKVKKEV SNDLRSTHEE  180
HKTLEVSQPK GKALHKEANV SYDYFNVEEV LDMIIVELSA DVKMEAHEEY QDGDDGFSLF  240
SY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1310RLRKKKVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.12e-33ERF family protein