PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG012070.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 172aa MW: 19500.5 Da PI: 8.511

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG012070.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.6	3.2e-21	36	95	2	56
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k TRIDC3AG012070.2 36 RQRWTPTQMQLQILENIFDQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSK 95 89***************99***********************************98 PP
2	Wus_type_Homeobox	100.7	1e-32	35	98	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR++ kq TRIDC3AG012070.2 35 ARQRWTPTQMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKWKQ 98 789**********************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MHRALTTHQD SIAGMSLDNL YCDPLMVHGG HKITARQRWT PTQMQLQILE NIFDQGNGTP 60 SKQKIKDITA ELSQHGQISE TNVYNWFQNR RARSKWKQAA SSLPNNAESE AEGDEESLTD 120 KKPRSDGSQQ QNMAVRAHNP ERISEMHRHF DAAERGQVRG PKMYGSSNDS SR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	98	RRARSKWKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	5e-47	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG012070.2