PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG012070.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 220aa MW: 24990 Da PI: 8.4957

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG012070.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66	5.2e-21	84	143	2	56
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k TRIDC3AG012070.3 84 RQRWTPTQMQLQILENIFDQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSK 143 89***************99***********************************98 PP
2	Wus_type_Homeobox	100	1.7e-32	83	146	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR++ kq TRIDC3AG012070.3 83 ARQRWTPTQMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKWKQ 146 789**********************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MSSSGKFLAR GVSQSWLRHC VKVITDEQIE VLRKQISIYA IICEQLIEMH RALTTHQDSI 60 AGMSLDNLYC DPLMVHGGHK ITARQRWTPT QMQLQILENI FDQGNGTPSK QKIKDITAEL 120 SQHGQISETN VYNWFQNRRA RSKWKQAASS LPNNAESEAE GDEESLTDKK PRSDGSQQQN 180 MAVRAHNPER ISEMHRHFDA AERGQVRGPK MYGSSNDSSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	146	RRARSKWKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-63	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG012070.3