PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG012070.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 158aa    MW: 17980.8 Da    PI: 8.4986
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG012070.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.92.7e-212281256
                      T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
          Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                      r+R+t+t+ ql++Le+ F + n +ps++++++++++l    +++e++V++WFqNrRa+ k
  TRIDC3AG012070.4 22 RQRWTPTQMQLQILENIFDQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSK 81
                      89*****************99*************************************98 PP
2Wus_type_Homeobox1018.6e-332184265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ar+RWtPt+ Q++iLe+++++G  tP+k++i++itaeL+++G+i+++NV++WFQNr+aR++ kq
   TRIDC3AG012070.4 21 ARQRWTPTQMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKWKQ 84
                       789**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MSLDNLYCDP LMVHGGHKIT ARQRWTPTQM QLQILENIFD QGNGTPSKQK IKDITAELSQ  60
HGQISETNVY NWFQNRRARS KWKQAASSLP NNAESEAEGD EESLTDKKPR SDGSQQQNMA  120
VRAHNPERIS EMHRHFDAAE RGQVRGPKMY GSSNDSSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17684RRARSKWKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.11e-42WOX family protein