PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG012560.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 200aa    MW: 22032.1 Da    PI: 8.8559
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG012560.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.2e-101157354
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      +ah+e+ErrRR riN  +  Lr+++P       k ++Ka+ L ++v+ +++L
  TRIDC3AG012560.1 11 KAHSEAERRRRVRINAHLTALRRMIPDT-----KQMDKAALLARVVDQVRQL 57
                      69*************************9.....67************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
GRTAPEARAL KAHSEAERRR RVRINAHLTA LRRMIPDTKQ MDKAALLARV VDQVRQLKRR  60
ASEAAQQTPA VPPETDEVSV EFCCTGDTDD DDSRLYIKAS VSCDDRPDLV AGFIQALHGL  120
RLRTVRAEVS SLGGRVQHVF TLCKEEEGSA GCAGLNSLKE AVRFALAKVA SSELVCGGSP  180
FQFQSKRQRI LESHYSIMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.19e-37bHLH family protein