PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG013260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 242aa    MW: 26005.2 Da    PI: 7.0028
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG013260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.59.8e-161462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      rg+W++eEd+ l d+ +++G+  +W t +++ g++R++k+c++rw++yl
  TRIDC3AG013260.1 14 RGPWSPEEDDALRDYMQLHGNTgSWITLPNKAGLKRCGKSCRLRWLNYL 62
                      89*********************************************97 PP
2Myb_DNA-binding44.24.4e-1469111246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g +T eEd +++ +  qlG++ W++Ia+ +  +Rt++++k++w++
  TRIDC3AG013260.1  69 GGFTDEEDTIIYSLYSQLGSK-WSLIASQLE-RRTDNDVKNHWNT 111
                       569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGRAPCCDRA AVKRGPWSPE EDDALRDYMQ LHGNTGSWIT LPNKAGLKRC GKSCRLRWLN  60
YLRPDIRHGG FTDEEDTIIY SLYSQLGSKW SLIASQLERR TDNDVKNHWN TKLKKRLAAA  120
AAAFSTCRSP SFMPLPAPAP AHAHPSPLLP LPVPTVKAET YTYDDFLAPT AGLQDPFAAE  180
GSSSASAGST SASAASSGSN WSAVDNAGGF FVDFCAAGAD LAAADQFLGG FYYPLDPTLS  240
LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.17e-64MYB family protein