PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG013850.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1061aa MW: 119363 Da PI: 8.4372

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG013850.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.7	4.8e-14	46	97	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3AG013850.2 46 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 97 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1061 aa Download sequence
ARRLHRRPRA SSSGLRCLRP VRGLWQLGFE MMAKGFLAKS DNAGTKKSPL QIQMLESFYS 60 EVQYPKPEDL TEYAASVGLT YNQVRIWFKE RRRKERRHME AAEVHVETQA SARSNWPRCS 120 SSRSSNSSQS PMQVADTTGH HSYQDQSVLK KRKIMSPTAQ RSTLPFENND PVRKHGKGKG 180 LMTVWHAMYS QTAEIQDCSS FIDESGCLRS LRPFEDFGGK LAQKQTLPRK KVNKKSRPAP 240 SKRKVTCGRV TDLKEHPLVE CHLSVDESES SELRTEHATL VDDEELELSE LQAGPNPLRC 300 SAHISSTGRH GCPLCKDLLA RFPPTSVRMK QPFPTKPWES SPEMVKKLFQ VVRFVYTHFG 360 SMDVHPFTFD EFAQAFHDKD SLLLGKVHVS LLKLLMLNTE RGSGSVFVPR SSKDSRFSSF 420 LNFVREQEFD VNFWIKSLNS LTWVEILRQV LVASGFGSDH HMLNRNFFNK EKNQMVKYGL 480 RPRTLKGELF ALLSKKGSGG LKVAELAKSP QIIGLNLSGA SEVEQLIFST LSSDITLFEK 540 IAPSAYRLRV DPRIKGKEDS RSDTEDSGTV DDDGDASSSG DESDGPQESY PEHESRIIRW 600 RQKNVHKNMN KCSEIDESYS GERWLLGLME GEYSDLSIDE KLDCLVALID VVSGAGSVPR 660 LEEPQSVLSN IQRAQSHASG GKIKKCTRTI YQSSDEYLNR PGSSHSFDSS MQGQSGSLRS 720 QDYIADSGAN ESPTGFAHQP QIVLLGSDRR YNNYWLFLGP CRADDPGHRR VYFESSEDGH 780 WEVIDSPQDL LSLLSVLDIR GTREAHLLAS MKKRQSCLFE GMKKHLEDGC VVALTASSDS 840 SRSETSSGNR YSPKPSSGDG ASPLSDIDSA SVPTYLAGNL QNASSAIGIG VGRRSDEKML 900 KWERLQALDK WIWTSFYSSL TAVKCGKRSF KESLVHCESC HDLYWRDEKH CRICHSTFEV 960 GFDLEERYAI HAATCREPED LYDVPNHKVL PSQLQALKAA IHAIEARMPT AAFTGLWMKS 1020 SHNLWVKRLR RTSSLPELLQ VFLLILLGQL MRIGCTNAHQ Q

Sequence ? help Back to Top

Protein Sequence Length: 1061 aa Download sequence

ARRLHRRPRA SSSGLRCLRP VRGLWQLGFE MMAKGFLAKS DNAGTKKSPL QIQMLESFYS  60
EVQYPKPEDL TEYAASVGLT YNQVRIWFKE RRRKERRHME AAEVHVETQA SARSNWPRCS  120
SSRSSNSSQS PMQVADTTGH HSYQDQSVLK KRKIMSPTAQ RSTLPFENND PVRKHGKGKG  180
LMTVWHAMYS QTAEIQDCSS FIDESGCLRS LRPFEDFGGK LAQKQTLPRK KVNKKSRPAP  240
SKRKVTCGRV TDLKEHPLVE CHLSVDESES SELRTEHATL VDDEELELSE LQAGPNPLRC  300
SAHISSTGRH GCPLCKDLLA RFPPTSVRMK QPFPTKPWES SPEMVKKLFQ VVRFVYTHFG  360
SMDVHPFTFD EFAQAFHDKD SLLLGKVHVS LLKLLMLNTE RGSGSVFVPR SSKDSRFSSF  420
LNFVREQEFD VNFWIKSLNS LTWVEILRQV LVASGFGSDH HMLNRNFFNK EKNQMVKYGL  480
RPRTLKGELF ALLSKKGSGG LKVAELAKSP QIIGLNLSGA SEVEQLIFST LSSDITLFEK  540
IAPSAYRLRV DPRIKGKEDS RSDTEDSGTV DDDGDASSSG DESDGPQESY PEHESRIIRW  600
RQKNVHKNMN KCSEIDESYS GERWLLGLME GEYSDLSIDE KLDCLVALID VVSGAGSVPR  660
LEEPQSVLSN IQRAQSHASG GKIKKCTRTI YQSSDEYLNR PGSSHSFDSS MQGQSGSLRS  720
QDYIADSGAN ESPTGFAHQP QIVLLGSDRR YNNYWLFLGP CRADDPGHRR VYFESSEDGH  780
WEVIDSPQDL LSLLSVLDIR GTREAHLLAS MKKRQSCLFE GMKKHLEDGC VVALTASSDS  840
SRSETSSGNR YSPKPSSGDG ASPLSDIDSA SVPTYLAGNL QNASSAIGIG VGRRSDEKML  900
KWERLQALDK WIWTSFYSSL TAVKCGKRSF KESLVHCESC HDLYWRDEKH CRICHSTFEV  960
GFDLEERYAI HAATCREPED LYDVPNHKVL PSQLQALKAA IHAIEARMPT AAFTGLWMKS  1020
SHNLWVKRLR RTSSLPELLQ VFLLILLGQL MRIGCTNAHQ Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	179	KKRKIMSPTAQRSTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-112	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG013850.2