PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG013850.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1113aa MW: 124945 Da PI: 8.1201

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG013850.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	5.1e-14	44	95	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3AG013850.3 44 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 95 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1113 aa Download sequence
RLHRRPRASS SGLRCLRPVR GLWQLGFEMM AKGFLAKSDN AGTKKSPLQI QMLESFYSEV 60 QYPKPEDLTE YAASVGLTYN QVRIWFKERR RKERRHMEAA EVHVETQASA RSNWPRCSSS 120 RSSNSSQSPM QDTTGHHSYQ DQSVLKKRKI MSPTAQRSTL PFENNDPVRK HGKGKGLMTV 180 WHAMYSQTAE IQDCSSFIDE SGCLRSLRPF EDFGGKLAQK QTLPRKKVNK KSRPAPSKRK 240 VTCGRVTDLK EHPLVECHLS VDESESSELR TEHATLVDDE ELELSELQAG PNPLRCSAHI 300 SSTGRHGCPL CKDLLARFPP TSVRMKQPFP TKPWESSPEM VKKLFQVVRF VYTHFGSMDV 360 HPFTFDEFAQ AFHDKDSLLL GKVHVSLLKL LMLNTERGSG SVFVPRSSKD SRFSSFLNFV 420 REQEFDVNFW IKSLNSLTWV EILRQVLVAS GFGSDHHMLN RNFFNKEKNQ MVKYGLRPRT 480 LKGELFALLS KKGSGGLKVA ELAKSPQIIG LNLSGASEVE QLIFSTLSSD ITLFEKIAPS 540 AYRLRVDPRI KGKEDSRSDT EDSGTVDDDG DASSSGDESD GPQESYPEHE SRIIRWRQKN 600 VHKNMNKCSE IDESYSGERW LLGLMEGEYS DLSIDEKLDC LVALIDVVSG AGSVPRLEEP 660 QSVLSNIQRA QSHASGGKIK KCTRTIYQSS DEYLNRPGSS HSFDSSMQGQ SGSLRSQDYI 720 ADSGANESPT GFAHQPQIVL LGSDRRYNNY WLFLGPCRAD DPGHRRVYFE SSEDGHWEVI 780 DSPQDLLSLL SVLDIRGTRE AHLLASMKKR QSCLFEGMKK HLEDGCVVAL TASSDSSRSE 840 TSSGNRYSPK PSSGDGASPL SDIDSASVPT YLAGNLQNAS SAIGIGVGRR SDEKMLKWER 900 LQALDKWIWT SFYSSLTAVK CGKRSFKESL VHCESCHDLY WRDEKHCRIC HSTFEVGFDL 960 EERYAIHAAT CREPEDLYDV PNHKVLPSQL QALKAAIHAI EARMPTAAFT GLWMKSSHNL 1020 WVKRLRRTSS LPELLQVLVD FVGAIDEDWL YQRSSAVSFS SYVDDITVYF QTMPQTTSAV 1080 ALWVVKLDAL IAPHLAQADS GRGLGKGSIQ TRA

Sequence ? help Back to Top

Protein Sequence Length: 1113 aa Download sequence

RLHRRPRASS SGLRCLRPVR GLWQLGFEMM AKGFLAKSDN AGTKKSPLQI QMLESFYSEV  60
QYPKPEDLTE YAASVGLTYN QVRIWFKERR RKERRHMEAA EVHVETQASA RSNWPRCSSS  120
RSSNSSQSPM QDTTGHHSYQ DQSVLKKRKI MSPTAQRSTL PFENNDPVRK HGKGKGLMTV  180
WHAMYSQTAE IQDCSSFIDE SGCLRSLRPF EDFGGKLAQK QTLPRKKVNK KSRPAPSKRK  240
VTCGRVTDLK EHPLVECHLS VDESESSELR TEHATLVDDE ELELSELQAG PNPLRCSAHI  300
SSTGRHGCPL CKDLLARFPP TSVRMKQPFP TKPWESSPEM VKKLFQVVRF VYTHFGSMDV  360
HPFTFDEFAQ AFHDKDSLLL GKVHVSLLKL LMLNTERGSG SVFVPRSSKD SRFSSFLNFV  420
REQEFDVNFW IKSLNSLTWV EILRQVLVAS GFGSDHHMLN RNFFNKEKNQ MVKYGLRPRT  480
LKGELFALLS KKGSGGLKVA ELAKSPQIIG LNLSGASEVE QLIFSTLSSD ITLFEKIAPS  540
AYRLRVDPRI KGKEDSRSDT EDSGTVDDDG DASSSGDESD GPQESYPEHE SRIIRWRQKN  600
VHKNMNKCSE IDESYSGERW LLGLMEGEYS DLSIDEKLDC LVALIDVVSG AGSVPRLEEP  660
QSVLSNIQRA QSHASGGKIK KCTRTIYQSS DEYLNRPGSS HSFDSSMQGQ SGSLRSQDYI  720
ADSGANESPT GFAHQPQIVL LGSDRRYNNY WLFLGPCRAD DPGHRRVYFE SSEDGHWEVI  780
DSPQDLLSLL SVLDIRGTRE AHLLASMKKR QSCLFEGMKK HLEDGCVVAL TASSDSSRSE  840
TSSGNRYSPK PSSGDGASPL SDIDSASVPT YLAGNLQNAS SAIGIGVGRR SDEKMLKWER  900
LQALDKWIWT SFYSSLTAVK CGKRSFKESL VHCESCHDLY WRDEKHCRIC HSTFEVGFDL  960
EERYAIHAAT CREPEDLYDV PNHKVLPSQL QALKAAIHAI EARMPTAAFT GLWMKSSHNL  1020
WVKRLRRTSS LPELLQVLVD FVGAIDEDWL YQRSSAVSFS SYVDDITVYF QTMPQTTSAV  1080
ALWVVKLDAL IAPHLAQADS GRGLGKGSIQ TRA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	175	KKRKIMSPTAQRSTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-136	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG013850.3