PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG017410.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 255aa MW: 27281.7 Da PI: 4.6852

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG017410.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.8	6.8e-06	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e e++ C ++ lC+ C H H + TRIDC3AG017410.1 4 LCSACEAAEARVVCCADEAALCARCDRDVHAAnrlagkHHR 44 7****99****************99955677778554 PP
2	zf-B_box	29.4	1.7e-09	59	99	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +++C+ ++e ++ +fC +++ llC++C ++ H H TRIDC3AG017410.1 59 APNCDICQEGHAYFFCVEDRALLCRSCDVAVHTAnafvsaH 99 689****88*****************99545566666 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MKVLCSACEA AEARVVCCAD EAALCARCDR DVHAANRLAG KHHRLPLLSA ASNPPAVSAP 60 NCDICQEGHA YFFCVEDRAL LCRSCDVAVH TANAFVSAHR RFLLTGVQVG LEPDEQEESV 120 PEPEPEPQPP NNASSAPLPP PMCHRKRSPT PLYSDGDIDW AAGSDVGITG NLPDWSVIDE 180 QFGSATPAMR PAEPEVIKAP PKKSPRVAVT AASAALFGGS MPDWPLDEFF GFTEFNSGFG 240 FAENGTSKEI NPRLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-30	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG017410.1