PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG018470.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 457aa MW: 47945.2 Da PI: 6.9545

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG018470.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	106	5.8e-33	81	178	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesss 79 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai+ l + ++++s+++++s TRIDC3AG018470.3 81 TGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKDAIDNLDTLpawqptavapsasnaAAPPSSSTQPDSAD 173 79**************************************************************66666655544433322222222222222 PP TCP 80 ssasnsssgkaaksaakskksqksa 104 +s++ + TRIDC3AG018470.3 174 NSDD--------------------Q 178 2222....................1 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MGDAGQSHHH HGLHTQLLSF GGADHHMHQF TAQAQPPAAS QTRARGGRGG EMVPAATPAR 60 VRGGGGGEIV AVQGGHIVRS TGRKDRHSKV CTARGPRDRR VRLSAHTAIQ FYDVQDRLGY 120 DRPSKAVDWL IKNAKDAIDN LDTLPAWQPT AVAPSASNAA APPSSSTQPD SADNSDDQAQ 180 AITIAHSSFD FAGSGGAGGA TGGISFLPPS LDSDSIADTI KSFFPMGGTA GGEPSSSTVA 240 AHSSAMGFQG YTPDLLSRTG SQSQELRLSL QPLPDPMFHH HHHQQQQQQE QHRSHGHDGN 300 GTGQQALFPG AASYSFGGGG AMWGEQAASQ RMMPWNVADP GGGSTGGYLF NVSQQAAHMQ 360 AALSGQSQFF FQRGPLQSSN QPSDRGWPET VEADDNHPMQ QQQQQHQGGL NPSVSAIGFG 420 PGVSFSGFRV PARMQGNEEH NGGNGDKPPS VSSASHH

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MGDAGQSHHH HGLHTQLLSF GGADHHMHQF TAQAQPPAAS QTRARGGRGG EMVPAATPAR  60
VRGGGGGEIV AVQGGHIVRS TGRKDRHSKV CTARGPRDRR VRLSAHTAIQ FYDVQDRLGY  120
DRPSKAVDWL IKNAKDAIDN LDTLPAWQPT AVAPSASNAA APPSSSTQPD SADNSDDQAQ  180
AITIAHSSFD FAGSGGAGGA TGGISFLPPS LDSDSIADTI KSFFPMGGTA GGEPSSSTVA  240
AHSSAMGFQG YTPDLLSRTG SQSQELRLSL QPLPDPMFHH HHHQQQQQQE QHRSHGHDGN  300
GTGQQALFPG AASYSFGGGG AMWGEQAASQ RMMPWNVADP GGGSTGGYLF NVSQQAAHMQ  360
AALSGQSQFF FQRGPLQSSN QPSDRGWPET VEADDNHPMQ QQQQQHQGGL NPSVSAIGFG  420
PGVSFSGFRV PARMQGNEEH NGGNGDKPPS VSSASHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-38	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG018470.3