PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG019890.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 353aa    MW: 38531.4 Da    PI: 4.3286
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG019890.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19123172255
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +++GVr+++ +g+++AeIrd +     r  r++lg+f+taeeAak ++ a+ kl+g
  TRIDC3AG019890.2 123 RFRGVRRRP-WGKYAAEIRDpW-----RrVRVWLGTFDTAEEAAKVYDSAAIKLRG 172
                       69*******.**********88.....55*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
SSMWPMEEEF FMAVKRTEHV EVTSRSVAPS ARGEEGFGGG EQPKMVRVFC DDFDATDSSS  60
DEEEGERRRV KRYVQEIRLQ PAVQVKVEES APVAKAASAT ATTRPRVMVP VRKRKAEAGG  120
ERRFRGVRRR PWGKYAAEIR DPWRRVRVWL GTFDTAEEAA KVYDSAAIKL RGPDATVNFQ  180
QSEDGEDMEV PAEVAERLPQ PPAGSKNASS SATSYDSCEE SHVAAASPTS VLRSFPQSTL  240
GAAVDDDSSK KPSSSSSTAE TDESSGVFGC SFSGDDFAGE LAPLYTDFDL LSDFAEPPMD  300
FLSNLPEPAF AFSSDCSSSA YNPCPPSPAT LQQADEFFDD ITDLFQIDPL PVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114131RKAEAGGERRFRGVRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.12e-22ERF family protein