PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG020650.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 726aa MW: 80033.1 Da PI: 5.1385

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG020650.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.7	1.5e-19	25	71	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3AG020650.9 25 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 71 79****************************.***********97 PP
2	Myb_DNA-binding	49.6	9.4e-16	77	119	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3AG020650.9 77 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 119 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
ECFPDRTDVQ CLHRWQKVLN PELIKGPWSK EEDDIIVEMV KKYGPKKWST IAQALPGRIG 60 KQCRERWHNH LNPGINKDAW TQEEEITLIH AHRMYGNKWA ELTKFLPGRT DNSIKNHWNS 120 SVKKKIDSYM SSGLLAQVSR LPLIEHHAHF NSSPAITQQN SEDSDSNAVR EVEDSSGCSQ 180 SSLAMVSCSQ AQDTNLALSC DLHVNADPSK TEAHDSQSSM CQEGYTSTEG VASALSEVHC 240 HASSSRFGSD KLLQQEISQR MDLQMDIDET PGNSMFENNQ TICSTSNNER PMLQYEIAPD 300 MPISVLTNVS GAEPKLHFMS EADFSSPNCL KSELWQDVSF QSLLSGPDVV DADSLSRLNH 360 HSDTHSSEAD THFLAAPNPS HTSNPSSMMM AAYGQDPSLS VPQSLIPNGL SDVADEKSRE 420 MQVSGSEMIT CMHDSFGDSE QFATPGSTDG RHGASAIIER IPEYGDKQLT DAEEPASSMA 480 KEPPLAQGEA ASDEKQDKGA LFYEPPRFPS MDVPFVSCDL VTSGDLQEYS PLGIRQLMRS 540 TMSVTTPLRL WGSPTHDESP DVVLKSAAKS FISTPSILKK RPRDLSSPTL EKGIEKKSRT 600 EQDSGVLGTS SVSAQTSCMH AIKDKGIVTE SVFCTNRSSS FKPLEKKLEF CDENKGNLGE 660 SEQAKDGRNA QNNHPVDEHA RGEQCSTANM VNINDEAGAK CHRQLFLLST RAMTFLIMAQ 720 MPCIRK

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

ECFPDRTDVQ CLHRWQKVLN PELIKGPWSK EEDDIIVEMV KKYGPKKWST IAQALPGRIG  60
KQCRERWHNH LNPGINKDAW TQEEEITLIH AHRMYGNKWA ELTKFLPGRT DNSIKNHWNS  120
SVKKKIDSYM SSGLLAQVSR LPLIEHHAHF NSSPAITQQN SEDSDSNAVR EVEDSSGCSQ  180
SSLAMVSCSQ AQDTNLALSC DLHVNADPSK TEAHDSQSSM CQEGYTSTEG VASALSEVHC  240
HASSSRFGSD KLLQQEISQR MDLQMDIDET PGNSMFENNQ TICSTSNNER PMLQYEIAPD  300
MPISVLTNVS GAEPKLHFMS EADFSSPNCL KSELWQDVSF QSLLSGPDVV DADSLSRLNH  360
HSDTHSSEAD THFLAAPNPS HTSNPSSMMM AAYGQDPSLS VPQSLIPNGL SDVADEKSRE  420
MQVSGSEMIT CMHDSFGDSE QFATPGSTDG RHGASAIIER IPEYGDKQLT DAEEPASSMA  480
KEPPLAQGEA ASDEKQDKGA LFYEPPRFPS MDVPFVSCDL VTSGDLQEYS PLGIRQLMRS  540
TMSVTTPLRL WGSPTHDESP DVVLKSAAKS FISTPSILKK RPRDLSSPTL EKGIEKKSRT  600
EQDSGVLGTS SVSAQTSCMH AIKDKGIVTE SVFCTNRSSS FKPLEKKLEF CDENKGNLGE  660
SEQAKDGRNA QNNHPVDEHA RGEQCSTANM VNINDEAGAK CHRQLFLLST RAMTFLIMAQ  720
MPCIRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-129	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG020650.9