PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021790.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 750aa MW: 82153.6 Da PI: 6.1101

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021790.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.2	4e-29	400	451	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ TRIDC3AG021790.6 400 AEKTISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 451 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence
MMYMFSVDGD NAGELGLPGR VYKQKVPEWT PNVQYYSSTE YPRLNHAISY NVHGTVALPV 60 FDPSVQSCIA VVELIMTSKK INYADEVDKV CKALEAVNLK STEILEHPNV QICNEGRQSA 120 LVEILEILTV VCEEHKLPLA QTWVPCKYRS VLAHGGGVKK SCLSFDGSCM GEVCMSTSDV 180 AFHVIDAHMW GFRDACVEHH LQKGQGVSGK AFIYHRPCFS KDISQFCKLE YPLVHYARMF 240 GLAGCFAICL QSPYTGDDYY MLEFFLPPSC KEEDDQNALL ESILGLINQC LRNLKVAGNG 300 ESNEASLQLS NVIMIESEDF KTNVHFENSE GFRESPEGDT HGGAHEFDKA NSKVSEGHLL 360 ADDNSQNNGV SVSRPNGSAA SDSSLLHKNG KPPERRRGKA EKTISLEVLQ QYFSGSLKNA 420 AKSLGVCPTT MKRICRQHGI SRWPSRKINK VNRSLSKLKQ VIESVQGSDA AFNLTSITGP 480 LPTIPVGPSS DSFNKEKASE SKAEHSNRAV DGDRDSSLQK PQENGSHFGA LMSQQGFADT 540 GNNVQLEADK ASLSRSSSGE GSINSRTSEG SCQGSPANQT FVCQPIASMF LEPQEPQLNP 600 EGFTKEPFQE PELPLSRMLI EDSGSSKDLK NLFGSAIGQP MLAPPSNFGP MRNSGTVTIK 660 ASFKEDIVRF RFPCSSSVMA LKDEVAKRLR MDAGMFDIKY LDDDHEWVKL ACNADLEECI 720 EISRHSGTHV IRLLVTDVAA HIGSSCGSSG

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence

MMYMFSVDGD NAGELGLPGR VYKQKVPEWT PNVQYYSSTE YPRLNHAISY NVHGTVALPV  60
FDPSVQSCIA VVELIMTSKK INYADEVDKV CKALEAVNLK STEILEHPNV QICNEGRQSA  120
LVEILEILTV VCEEHKLPLA QTWVPCKYRS VLAHGGGVKK SCLSFDGSCM GEVCMSTSDV  180
AFHVIDAHMW GFRDACVEHH LQKGQGVSGK AFIYHRPCFS KDISQFCKLE YPLVHYARMF  240
GLAGCFAICL QSPYTGDDYY MLEFFLPPSC KEEDDQNALL ESILGLINQC LRNLKVAGNG  300
ESNEASLQLS NVIMIESEDF KTNVHFENSE GFRESPEGDT HGGAHEFDKA NSKVSEGHLL  360
ADDNSQNNGV SVSRPNGSAA SDSSLLHKNG KPPERRRGKA EKTISLEVLQ QYFSGSLKNA  420
AKSLGVCPTT MKRICRQHGI SRWPSRKINK VNRSLSKLKQ VIESVQGSDA AFNLTSITGP  480
LPTIPVGPSS DSFNKEKASE SKAEHSNRAV DGDRDSSLQK PQENGSHFGA LMSQQGFADT  540
GNNVQLEADK ASLSRSSSGE GSINSRTSEG SCQGSPANQT FVCQPIASMF LEPQEPQLNP  600
EGFTKEPFQE PELPLSRMLI EDSGSSKDLK NLFGSAIGQP MLAPPSNFGP MRNSGTVTIK  660
ASFKEDIVRF RFPCSSSVMA LKDEVAKRLR MDAGMFDIKY LDDDHEWVKL ACNADLEECI  720
EISRHSGTHV IRLLVTDVAA HIGSSCGSSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021790.6