PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021790.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 622aa MW: 69753.9 Da PI: 7.9825

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021790.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.2	8e-29	488	538	1	51
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 aek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki++ TRIDC3AG021790.8 488 AEKTISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINK 538 589**********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
TPIKKTERLN NKWQFNLALH DDSTNSSCLF KEKLTHALRY FKESTDQHLL VQVWAPVKSG 60 DRYVLTTSGQ PFVLDHQSIG LLQYRAVSMM YMFSVDGDNA GELGLPGRVY KQKVPEWTPN 120 VQYYSSTEYP RLNHAISYNV HGTVALPVFD PSVQSCIAVV ELIMTSKKIN YADEVDKVCK 180 ALEAVNLKST EILEHPNVQI CNEGRQSALV EILEILTVVC EEHKLPLAQT WVPCKYRSVL 240 AHGGGVKKSC LSFDGSCMGE VCMSTSDVAF HVIDAHMWGF RDACVEHHLQ KGQGVSGKAF 300 IYHRPCFSKD ISQFCKLEYP LVHYARMFGL AGCFAICLQS PYTGDDYYML EFFLPPSCKE 360 EDDQNALLES ILGLINQCLR NLKVAGNGES NEASLQLSNV IMIESEDFKT NVHFENSEGF 420 RESPEGDTHG GAHEFDKANS KVSEGHLLAD DNSQNNGVSV SRPNGSAASD SSLLHKNGKP 480 PERRRGKAEK TISLEVLQQY FSGSLKNAAK SLGVCPTTMK RICRQHGISR WPSRKINKAL 540 SLLFLLVLHQ ILSIKRKQVK VKQNIQIVLL MVTEIHLYRS HKKMVATLVH SCPSKDLQTL 600 ETMFNLKQTK LLSREAHQEK AA

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

TPIKKTERLN NKWQFNLALH DDSTNSSCLF KEKLTHALRY FKESTDQHLL VQVWAPVKSG  60
DRYVLTTSGQ PFVLDHQSIG LLQYRAVSMM YMFSVDGDNA GELGLPGRVY KQKVPEWTPN  120
VQYYSSTEYP RLNHAISYNV HGTVALPVFD PSVQSCIAVV ELIMTSKKIN YADEVDKVCK  180
ALEAVNLKST EILEHPNVQI CNEGRQSALV EILEILTVVC EEHKLPLAQT WVPCKYRSVL  240
AHGGGVKKSC LSFDGSCMGE VCMSTSDVAF HVIDAHMWGF RDACVEHHLQ KGQGVSGKAF  300
IYHRPCFSKD ISQFCKLEYP LVHYARMFGL AGCFAICLQS PYTGDDYYML EFFLPPSCKE  360
EDDQNALLES ILGLINQCLR NLKVAGNGES NEASLQLSNV IMIESEDFKT NVHFENSEGF  420
RESPEGDTHG GAHEFDKANS KVSEGHLLAD DNSQNNGVSV SRPNGSAASD SSLLHKNGKP  480
PERRRGKAEK TISLEVLQQY FSGSLKNAAK SLGVCPTTMK RICRQHGISR WPSRKINKAL  540
SLLFLLVLHQ ILSIKRKQVK VKQNIQIVLL MVTEIHLYRS HKKMVATLVH SCPSKDLQTL  600
ETMFNLKQTK LLSREAHQEK AA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021790.8