PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG022500.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C3H

Protein Properties

Length: 165aa MW: 17096.2 Da PI: 7.6396

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG022500.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	27.7	4.6e-09	66	88	5	27
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 C++f rtGtCk+Gd C++ H++ TRIDC3AG022500.2 66 VCNHFVRTGTCKFGDACRYFHPK 88 6********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
SGTTPSAAKV TSPSPPSSRP MTHSLEHLAR PLPFLTLNLN PSSSAESHGG PSPLLQPDGA 60 ILGQGVCNHF VRTGTCKFGD ACRYFHPKPH AVNPALAPSG PVPGAMGQQS NFLGTQPNFV 120 GYPAVEGNSF SGNILTGHTS WGNLPPSLQP PPEGGYPPLP FVDWG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18550.1	8e-09	C3H family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG022500.2