PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG022500.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C3H

Protein Properties

Length: 166aa MW: 17607.1 Da PI: 11.577

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG022500.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	27.7	4.6e-09	67	89	5	27
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 C++f rtGtCk+Gd C++ H++ TRIDC3AG022500.4 67 VCNHFVRTGTCKFGDACRYFHPK 89 6********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
AAGQVLLRLL RQGVPGHRRR PQAPPPGRPA PPRQRPLVRL RPPPRLQSHG GPSPLLQPDG 60 AILGQGVCNH FVRTGTCKFG DACRYFHPKP HAVNPALAPS GPVPGAMGQQ SNFLGTQPNF 120 VGYPAVEGNS FSGNILTGHT SWGNLPPSLQ PPPEGGYPPL PFVDWG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18550.1	1e-08	C3H family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG022500.4