PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG022910.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 625aa MW: 66102.5 Da PI: 7.164

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG022910.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.6	1.6e-30	355	413	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ TRIDC3AG022910.4 355 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDRTILITTYEGTHNHP 413 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
APRPTGERLQ TPPSFGLYDT FLSLSLSLSL SLSPRLARRL SLLQGGSRFA WTRATSVAAE 60 EEEDCSPWTP PPRQLGFLNL LSPAPFHRSM EADDGGGGGG GRGRRSIEVD FFSDEKKNMK 120 KSRASAGADA EDHKDQASAA GLAIKKEDLT INLLTGNNTR SDRSMVVDDD GASRADEDRN 180 GRNTGELAAM QAELSRMNEE NQRLRGMLTQ VNSSYHALQM HLVALMQQRT QMPPVQPQQP 240 PTHEDGKNES AIVPRQFLGL GPSGASADVA EEPSNSSTEV GSPRRSSSNG NEDPERGDNP 300 DGPSTAGWLP GRGMSQQQQQ QLGAAAKGHD QQAQEATMRK ARVSVRARSE APIIADGCQW 360 RKYGQKMAKG NPCPRAYYRC TMATGCPVRK QVQRCAEDRT ILITTYEGTH NHPLPPAAMA 420 MASTTSAAAS MLLSGSMPSA DGAGLMSSNF LARTVLPCSS SMATISASAP FPTVTLDLTH 480 APPGAPNAMP LNVARPHAPG QFHVPMPGGG MAPAFAMPPH MLYNQSKFSG LQMSSDSVDA 540 GQFAQPRPPM GLPGQLSDTV SAAAAAITAD PNFTVALAAA ISSIMAGQHA AGNSNANNSN 600 NNTSNNNVTT TSNNTTSNNT NSETQ

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

APRPTGERLQ TPPSFGLYDT FLSLSLSLSL SLSPRLARRL SLLQGGSRFA WTRATSVAAE  60
EEEDCSPWTP PPRQLGFLNL LSPAPFHRSM EADDGGGGGG GRGRRSIEVD FFSDEKKNMK  120
KSRASAGADA EDHKDQASAA GLAIKKEDLT INLLTGNNTR SDRSMVVDDD GASRADEDRN  180
GRNTGELAAM QAELSRMNEE NQRLRGMLTQ VNSSYHALQM HLVALMQQRT QMPPVQPQQP  240
PTHEDGKNES AIVPRQFLGL GPSGASADVA EEPSNSSTEV GSPRRSSSNG NEDPERGDNP  300
DGPSTAGWLP GRGMSQQQQQ QLGAAAKGHD QQAQEATMRK ARVSVRARSE APIIADGCQW  360
RKYGQKMAKG NPCPRAYYRC TMATGCPVRK QVQRCAEDRT ILITTYEGTH NHPLPPAAMA  420
MASTTSAAAS MLLSGSMPSA DGAGLMSSNF LARTVLPCSS SMATISASAP FPTVTLDLTH  480
APPGAPNAMP LNVARPHAPG QFHVPMPGGG MAPAFAMPPH MLYNQSKFSG LQMSSDSVDA  540
GQFAQPRPPM GLPGQLSDTV SAAAAAITAD PNFTVALAAA ISSIMAGQHA AGNSNANNSN  600
NNTSNNNVTT TSNNTTSNNT NSETQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-115	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG022910.4