PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG024580.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 481aa    MW: 53206.6 Da    PI: 5.969
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG024580.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1645.5e-5191361128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGf FhP+d elv +yLkkk+ g+k+e  ++i+evdiyk+ePwdLp+  +v +++++w+fF+ rd+ky++g r+nrat +gyWk+tgkd++
  TRIDC3AG024580.1   9 LPPGFGFHPKDTELVAHYLKKKILGQKIEY-DIIPEVDIYKHEPWDLPAkcNVPTQDNKWHFFAARDRKYPNGARSNRATVAGYWKSTGKDRA 100
                       79****************************.99***************5346667999*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++ +++++g+kktLvf++gr p+g++t+W+mhey +
  TRIDC3AG024580.1 101 IKV-DKRTIGTKKTLVFHEGRPPTGKRTEWIMHEYYI 136
                       ***.999****************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    
METLRDMALP PGFGFHPKDT ELVAHYLKKK ILGQKIEYDI IPEVDIYKHE PWDLPAKCNV  60
PTQDNKWHFF AARDRKYPNG ARSNRATVAG YWKSTGKDRA IKVDKRTIGT KKTLVFHEGR  120
PPTGKRTEWI MHEYYIDENE CQACPDMKDA FVLCKVTKRI DWTSENGNEV GNNNPQPQQA  180
NVAAILAVSV EQPDTAASSI IGDELPSDAA TVAIPAHTTP DGNDDLKEWL EELLDTSFDP  240
SANTAVDSVS AQLSPDEQNA ESSNIGAMAP KVELDYASPN QTVVDDTDFL LPDDIHSMLY  300
PGSDDFTSWQ QTYFTAADPF SLSNNFMEEF QMKELQLPLE NNGPNLYEPA DTGIVVRTRH  360
GGTSAASAPP YKARLQQSLG RMVTSSSESI NQTIKFVDNN GHLDLMTNVK HQKKHVRDIT  420
SARQSDAKKC GGHNNQGFLR GIQRAFRGCS ATGLNILVAL CMVGVAAAIL HHGRHRGGIS  480
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.13e-66NAC family protein