PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG026130.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 223aa MW: 24492.3 Da PI: 9.7496

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG026130.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.4	1.2e-16	20	65	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++k+c++rw++ TRIDC3AG026130.5 20 RGHWRPAEDARLKELVGQYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 65 899***************************.*********996 PP
2	Myb_DNA-binding	56.7	5.3e-18	72	116	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eE+++l a++ +G++ W++Iar ++ gRt++ +k++w+ + TRIDC3AG026130.5 72 RRAFTEEEEDRLMAAHRAYGNK-WALIARLFP-GRTDNAVKNHWHVL 116 678*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
AADVDDAEDG GGGQGKLCSR GHWRPAEDAR LKELVGQYGP QNWNLIAEKL DGRSGKSCRL 60 RWFNQLDPRI NRRAFTEEEE DRLMAAHRAY GNKWALIARL FPGRTDNAVK NHWHVLMARR 120 QREQSGAFRR RSKPASSSSS SIAPAPHHPA PAVVLQHQHQ HQHLYQHHGA SPIPMPLQPF 180 AMGVAIATGV YSKAATATAT ASRAYSGGES DESASTCTTD LSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	3e-71	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG026130.5