PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG029280.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 299aa    MW: 33148.9 Da    PI: 5.3678
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG029280.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding513.3e-162067148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg W++eEde+l++ + ++G g+W++++r  g+ R++k+c++rw +yl
  TRIDC3AG029280.5 20 RGLWSPEEDEKLYNHIIRYGVGCWSSVPRLAGLERCGKSCRLRWINYL 67
                      788*******************************************97 PP
2Myb_DNA-binding46.11.1e-1473116146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+++++E++l+v ++k lG++ W+ Ia+ ++ gRt++++k+ w++
  TRIDC3AG029280.5  73 RGSFSQQEEDLIVSLHKILGNR-WSQIASQLP-GRTDNEIKNLWNS 116
                       899*******************.*********.*********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MGREAATAVA CSSNKPKLRR GLWSPEEDEK LYNHIIRYGV GCWSSVPRLA GLERCGKSCR  60
LRWINYLRPD LKRGSFSQQE EDLIVSLHKI LGNRWSQIAS QLPGRTDNEI KNLWNSCIKK  120
KLRQQSIDPT THEPLNDAAA VAEPHDECKQ LVPAAEDGGS VGSDDLLAPH SPVDCSFDPM  180
SVTNVPTMHM QGSYSLCDHA STYCAYTGGG DSSSNSNGTG TGTSTWTCGN VEPLPHMDMF  240
RDAEPYPFDP TKFSPWHQQH APDDDRGSAV FPIRSLSRDL PESCFELARG ALEDEFDFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.11e-70MYB family protein