PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG030560.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 425aa MW: 44080.3 Da PI: 5.3003

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG030560.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.3	1.1e-07	323	363	9	54
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P a K++ a++L +A +Y++ L TRIDC3AG030560.1 323 ARQRRERISERLRVLQKLVPGgA------KMDTASMLDEAANYLRFL 363 69****************966......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MDPGFCNDMI LSESAWNSGG GDGGAAGDVV NVVDGSGMTV LERLVLDEAL AAAIMELQGI 60 QVPCAGGKPM AGGLEAASLA FGATGTAPVT PAYAEVDGVV LQRQQHQHRH QGVMGMPVDY 120 DLVPAARAVT LATVPAAPSF PKGAAAGVVD AAAFDSGNNA LTSAVTAGTT RQCDEANGGA 180 KRQLRSSRKR RAADAPCPAA DGHPQSQENP LCSLLASTNT GDGGIQIAFS GGGGAAPSSK 240 RTKPSLSSTS SSISFDGRSS VNNGCDDVPR YEPDTEALAQ VKEMIYRAAA MRPVSLGVEE 300 EDTGERPSRR NVRISSDPQT VAARQRRERI SERLRVLQKL VPGGAKMDTA SMLDEAANYL 360 RFLKSQIREL QTLDRRNYGA NAISNTGMAP LMSYNNMPAF AFPATGAGET LGGGGGEEAF 420 MSSRF

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MDPGFCNDMI LSESAWNSGG GDGGAAGDVV NVVDGSGMTV LERLVLDEAL AAAIMELQGI  60
QVPCAGGKPM AGGLEAASLA FGATGTAPVT PAYAEVDGVV LQRQQHQHRH QGVMGMPVDY  120
DLVPAARAVT LATVPAAPSF PKGAAAGVVD AAAFDSGNNA LTSAVTAGTT RQCDEANGGA  180
KRQLRSSRKR RAADAPCPAA DGHPQSQENP LCSLLASTNT GDGGIQIAFS GGGGAAPSSK  240
RTKPSLSSTS SSISFDGRSS VNNGCDDVPR YEPDTEALAQ VKEMIYRAAA MRPVSLGVEE  300
EDTGERPSRR NVRISSDPQT VAARQRRERI SERLRVLQKL VPGGAKMDTA SMLDEAANYL  360
RFLKSQIREL QTLDRRNYGA NAISNTGMAP LMSYNNMPAF AFPATGAGET LGGGGGEEAF  420
MSSRF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	329	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	9e-35	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG030560.1