PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG030770.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 261aa MW: 29623.8 Da PI: 9.2734

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG030770.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.7	2e-05	83	103	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H TRIDC3AG030770.2 83 CEICGKGFQRDQNLQLHRRGH 103 *******************88 PP
2	zf-C2H2	12.3	0.0005	158	180	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + TRIDC3AG030770.2 158 WKCDKCSKKYAVQSDWKAHSKIC 180 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MYHHHLQQQQ QQRGEAEAAD QDQDSSMSNL TTSASASAKP PPPPPPTPAS NKRKRSLPGN 60 PDPESEVVAL SPATLMATNR FLCEICGKGF QRDQNLQLHR RGHNLPWKLK QRGSKEVVRK 120 KVYICPEASC VHHDPSRALG DLTGIKKHFF RKHGEKKWKC DKCSKKYAVQ SDWKAHSKIC 180 GTREYKCDCG TVFSRFLSLS SNLDPPLVLL LCYAMHHESF LPCSLADFSL LYILVPWQPN 240 LASALPTNYY YSRIQVEDRQ H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	121	KLKQRGSKEVVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	2e-83	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG030770.2