PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG030920.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 394aa MW: 42725.1 Da PI: 5.4177

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG030920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.3	5.8e-13	214	259	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + Er+RR+++N++f++Lr+llP++ K +K ++L+kA Y+k L+ TRIDC3AG030920.1 214 HMMSERKRREKLNDSFHTLRSLLPPC-----SKKDKTTVLTKAAGYLKTLE 259 7789*******************9.....699************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDDVWCSLDM AADIAGLHSA LADPFWPADL DLMVSTHEVE GMADMDASGF FVGGGDDRFM 60 LPSSTTSSLS SKRSLSLDSG GSSGSGSGSF SLDLADASRY QAPALPVPHN PLAGAVDHDD 120 EAIMRAMMAV MSSSSASPSS SASSHPQPFC RDRDSNMQQQ SAAMAPQLRG GRSGHVMVKS 180 SLSMSPERSS SGGRGQQQEE PTRAASGNTG QLYHMMSERK RREKLNDSFH TLRSLLPPCS 240 KKDKTTVLTK AAGYLKTLEA QVSELEEKNN KLEKHIPTYD CEEDVPHQQR RQRAKVQITK 300 AASDGVVNLT VMVMVECDVV ELVLRILECL RWMEQVNVMS VDADTYSPQV LLKAIASIKL 360 RIVDDDWNQA LFHEAMTKAV NDATASRPSL VLTA

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDDVWCSLDM AADIAGLHSA LADPFWPADL DLMVSTHEVE GMADMDASGF FVGGGDDRFM  60
LPSSTTSSLS SKRSLSLDSG GSSGSGSGSF SLDLADASRY QAPALPVPHN PLAGAVDHDD  120
EAIMRAMMAV MSSSSASPSS SASSHPQPFC RDRDSNMQQQ SAAMAPQLRG GRSGHVMVKS  180
SLSMSPERSS SGGRGQQQEE PTRAASGNTG QLYHMMSERK RREKLNDSFH TLRSLLPPCS  240
KKDKTTVLTK AAGYLKTLEA QVSELEEKNN KLEKHIPTYD CEEDVPHQQR RQRAKVQITK  300
AASDGVVNLT VMVMVECDVV ELVLRILECL RWMEQVNVMS VDADTYSPQV LLKAIASIKL  360
RIVDDDWNQA LFHEAMTKAV NDATASRPSL VLTA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	223	ERKRRE
2	219	224	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	6e-22	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG030920.1