PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG030920.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 353aa MW: 38297.2 Da PI: 6.7907

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG030920.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	4.9e-13	173	218	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + Er+RR+++N++f++Lr+llP++ K +K ++L+kA Y+k L+ TRIDC3AG030920.2 173 HMMSERKRREKLNDSFHTLRSLLPPC-----SKKDKTTVLTKAAGYLKTLE 218 7789*******************9.....699************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MADMDASGFF VGGGDDRFML PSSTTSSLSS KRSLSLDSGG SSGSGSGSFS LDLADASRYQ 60 APALPVPHNP LAGAVDHDDE AIMRAMMAVM SSSSASPSSS ASSHPQPFCR DRDSNMQQQS 120 AAMAPQLRGG RSGHVMVKSS LSMSPERSSS GGRGQQQEEP TRAASGNTGQ LYHMMSERKR 180 REKLNDSFHT LRSLLPPCSK KDKTTVLTKA AGYLKTLEAQ VSELEEKNNK LEKHIPTYDC 240 EEDVPHQQRR QRAKVQITKA ASDGVVNLTV MVMVECDVVE LVLRILECLR WMEQVNVMSV 300 DADTYSPQVL LKAIASIKLR IVDDDWNQAL FHEAMTKAVN DATASRPSLV LTA

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MADMDASGFF VGGGDDRFML PSSTTSSLSS KRSLSLDSGG SSGSGSGSFS LDLADASRYQ  60
APALPVPHNP LAGAVDHDDE AIMRAMMAVM SSSSASPSSS ASSHPQPFCR DRDSNMQQQS  120
AAMAPQLRGG RSGHVMVKSS LSMSPERSSS GGRGQQQEEP TRAASGNTGQ LYHMMSERKR  180
REKLNDSFHT LRSLLPPCSK KDKTTVLTKA AGYLKTLEAQ VSELEEKNNK LEKHIPTYDC  240
EEDVPHQQRR QRAKVQITKA ASDGVVNLTV MVMVECDVVE LVLRILECLR WMEQVNVMSV  300
DADTYSPQVL LKAIASIKLR IVDDDWNQAL FHEAMTKAVN DATASRPSLV LTA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	182	ERKRRE
2	178	183	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	3e-22	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG030920.2