PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG030920.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 276aa MW: 30620.8 Da PI: 8.2263

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG030920.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.8	1.9e-13	95	141	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + Er+RR+++N++f++Lr+llP++ sk +K ++L+kA Y+k L+ TRIDC3AG030920.3 95 HMMSERKRREKLNDSFHTLRSLLPPC----SKQKDKTTVLTKAAGYLKTLE 141 7789********************....67789***********985 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
DEAIMRAMMA VMSSSSASPS SSASSHPQPF CRDRDSNMQQ QSAAMAPQLR GGRSGHVMVK 60 SSLSMSPERS SSGGRGQQQE EPTRAASGNT GQLYHMMSER KRREKLNDSF HTLRSLLPPC 120 SKQKDKTTVL TKAAGYLKTL EAQVSELEEK NNKLEKHIPT YDCEEDVPHQ QRRQRAKVQI 180 TKAASDGVVN LTVMVMVECD VVELVLRILE CLRWMEQVNV MSVDADTYSP QVLLKAIASI 240 KLRIVDDDWN QALFHEAMTK AVNDATASRP SLVLTA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	104	ERKRRE
2	100	105	RKRREK
3	100	126	RKRREKLNDSFHTLRSLLPPCSKQKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	7e-21	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG030920.3