PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG030920.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 214aa    MW: 24544.3 Da    PI: 9.3659
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG030920.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.62.3e-132065555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      h + Er+RR+++N++f++Lr+llP++      K +K ++L+kA  Y+k L+
  TRIDC3AG030920.5 20 HMMSERKRREKLNDSFHTLRSLLPPC-----SKKDKTTVLTKAAGYLKTLE 65
                      7789*********************9.....699**************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
GQQQEEPTRA ASGNTGQLYH MMSERKRREK LNDSFHTLRS LLPPCSKKDK TTVLTKAAGY  60
LKTLEAQVSE LEEKNNKLEK HIPTYDCEED VPHQQRRQRA KVQITKAASD GVVNLTVMVM  120
VECDVVELVL RILECLRWME QVNVMSVDAD TYSPQVLLKA IASIKLRIVV RWRGFHLYLV  180
SSRLEQKQFH LTGGMYVYAG RRLEPGLVPR GHDQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12429ERKRRE
22530RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.12e-19bHLH family protein