PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG033290.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 92aa    MW: 10355.9 Da    PI: 6.9148
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG033290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.31.5e-09225427
                      ---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH  4 elCrffartGtCkyGdrCkFaHgp 27
                      + C+f+ +tG C yG +C+F+H++
  TRIDC3AG033290.1  2 VDCSFYIKTGSCMYGRTCRFNHPE 25
                      68********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
EVDCSFYIKT GSCMYGRTCR FNHPERHIQA SVVPGEMLNP AVKFLPSFDF RVTHVPIEPE  60
PITYPQRPGE TVCDLIGLHL IPLQSGSRLS NL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12680.11e-14C3H family protein