PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG033290.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 140aa    MW: 15133.2 Da    PI: 8.7608
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG033290.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH309.2e-106793127
                      --S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                      ++++ C+f+ +tG C yG +C+F+H++
  TRIDC3AG033290.4 67 PGEVDCSFYIKTGSCMYGRTCRFNHPE 93
                      57899********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
GKCKLGTNCK FIHAKDMEPP SSGGNESENT ATAEAAGHHG AVHDSVSAKK LAPVALEHNS  60
KGMPIRPGEV DCSFYIKTGS CMYGRTCRFN HPERHIQASV VPGEMLNPAV KFLPSFDFRV  120
THVPVRLNEG VRTGAVKYTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12680.15e-24C3H family protein