PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG034340.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 234aa    MW: 26285.2 Da    PI: 6.6064
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG034340.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.74e-164087148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT eEd++lv ++  +G g+W+  ar  g++R +k+c++rw++yl
  TRIDC3AG034340.2 40 KGPWTLEEDLILVGYISHHGEGSWDNLARSAGLNRNGKSCRLRWLNYL 87
                      79********************************************97 PP
2Myb_DNA-binding49.78.6e-1693136146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ ++eEd  + +++ +lG++ W+ Ia++++ gRt++++k++w++
  TRIDC3AG034340.2  93 RGSISPEEDMVIRELHSRLGNK-WAEIAKHLP-GRTDNEVKNYWRT 136
                       7888******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
FTEDDTTLGS SVPEREREGE KLTRMARMMC GRAGEPAVRK GPWTLEEDLI LVGYISHHGE  60
GSWDNLARSA GLNRNGKSCR LRWLNYLRPG LRRGSISPEE DMVIRELHSR LGNKWAEIAK  120
HLPGRTDNEV KNYWRTKVHK KAPGHQKQLP ATSEATSSVS ASTSHASSTV GDEYTQTSFP  180
YPDLSWVAAD HHETVDVGAS ATRFFPSEFG GNFWNVQDNF WETLPLSDPV YEAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27810.17e-56MYB family protein