PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG034340.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 170aa    MW: 19068.2 Da    PI: 8.4781
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG034340.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.45e-162972146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg+ ++eEd  + +++ +lG++ W+ Ia++++ gRt++++k++w++
  TRIDC3AG034340.3 29 RGSISPEEDMVIRELHSRLGNK-WAEIAKHLP-GRTDNEVKNYWRT 72
                      7889******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
LARSAAGLNR NGKSCRLRWL NYLRPGLRRG SISPEEDMVI RELHSRLGNK WAEIAKHLPG  60
RTDNEVKNYW RTKVHKKAPG HQKQLPATSE ATSSVSASTS HASSTVGDEY TQTSFPYPDL  120
SWVAADHHET VDVGASATRF FPSEFGGNFW NVQDNFWETL PLSDPVYEAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27810.12e-36MYB family protein