PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG034640.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 223aa MW: 24881.3 Da PI: 9.1494

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG034640.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.9	8.2e-19	80	133	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ +++keq + Lee F+ n+++s +++e LA kl+L rqV vWFqNrRa+ k TRIDC3AG034640.2 80 KKLRLSKEQSRLLEESFRLNHTLSPKQKEALAIKLKLRPRQVEVWFQNRRARTK 133 67789***********************************************98 PP
2	HD-ZIP_I/II	119.6	1.6e-38	80	167	2	89
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 kk+rlskeq++lLEesF+ +++L+p++K++la +L+l+prqv+vWFqnrRARtk+k++E+++e+Lkr++ +l+een+rL++eveeLr+ TRIDC3AG034640.2 80 KKLRLSKEQSRLLEESFRLNHTLSPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKHTEMECEYLKRCFGSLTEENRRLQREVEELRA 167 9*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
VMGATSPSGL ELTMAVPGLS SSSGSEGFVC NNNISNNGGG NMRDLDMNQP ASGGEEEDFL 60 MGGVEEDEEE RGAGGPHRPK KLRLSKEQSR LLEESFRLNH TLSPKQKEAL AIKLKLRPRQ 120 VEVWFQNRRA RTKLKHTEME CEYLKRCFGS LTEENRRLQR EVEELRAMRM APPTVLSPHT 180 RQPLPASALT MCPRCERVTA ATCPRITRPA ASPFHPRRPS AAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	2e-64	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG034640.2