PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG034640.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 152aa MW: 16570.7 Da PI: 7.3531

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG034640.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58	1.6e-18	101	152	3	54
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 k+ +++keq + Lee F+ n+++s +++e LA kl+L rqV vWFqNrRa+ TRIDC3AG034640.3 101 KKLRLSKEQSRLLEESFRLNHTLSPKQKEALAIKLKLRPRQVEVWFQNRRAR 152 67789*********************************************98 PP
2	HD-ZIP_I/II	76.5	4.5e-25	101	152	2	53
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRAR 53 kk+rlskeq++lLEesF+ +++L+p++K++la +L+l+prqv+vWFqnrRAR TRIDC3AG034640.3 101 KKLRLSKEQSRLLEESFRLNHTLSPKQKEALAIKLKLRPRQVEVWFQNRRAR 152 9**************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence
LLLSPSSSPF PCSCFRIGLS PVMGATSPSG LELTMAVPGL SSSSGSEGFV CNNNISNNGG 60 GNMRDLDMNQ PASGGEEEDF LMGGVEEDEE ERGAGGPHRP KKLRLSKEQS RLLEESFRLN 120 HTLSPKQKEA LAIKLKLRPR QVEVWFQNRR AR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70920.1	4e-29	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG034640.3