PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG036810.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 244aa    MW: 26170 Da    PI: 7.5101
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG036810.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.79.4e-1947101357
                        --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
           Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                        kR   t++ql++Le+ +  ++yps+++r+eL+ k+gL++rq ++WF+ rR k++k
  TRIDC3AG036810.11  47 KRMMKTPYQLDVLEQTYLAEQYPSEAMRAELSVKIGLSDRQLQMWFCHRRLKDRK 101
                        79999************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
AGAGDGPPRE APEERTPQIP APPAVAAPAS ASGGAAGPSG SGEKPVKRMM KTPYQLDVLE  60
QTYLAEQYPS EAMRAELSVK IGLSDRQLQM WFCHRRLKDR KPPAKRQRRD EEGPATPVPV  120
PPPVLPLQAM PLASTDLMMS AGSPYDEPLL PLAHSRRGAG RSSAVPRISA PDIGRDIGRR  180
YYEPLPVMLP PPVAPMQFRQ AELRVITSVE SQLGEPLRED GPVLGVDFDP LPPGAFGAPI  240
GTFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44180.29e-39HB-other family protein