PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG036810.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1429aa MW: 160515 Da PI: 6.3738

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG036810.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1.1e-17	17	71	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++ql++Le+ + ++yps+++r+eL+ k+gL++rq ++WF+ rR k++k TRIDC3AG036810.2 17 KRMMKTPYQLDVLEQTYLAEQYPSEAMRAELSVKIGLSDRQLQMWFCHRRLKDRK 71 79999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1429 aa Download sequence
ASGGAAGPSG SGEKPVKRMM KTPYQLDVLE QTYLAEQYPS EAMRAELSVK IGLSDRQLQM 60 WFCHRRLKDR KPPAKRQRRD EEGPATPVPV PPPVLPLQAM PLASTDLMMS AGSPYDEPLL 120 PLAHSRRGAG RSSAVPRISA PDIGRDIGRR YYEPLPVMLP PPVAPMQFRQ AELRVITSVE 180 SQLGEPLRED GPVLGVDFDP LPPGAFGAPI VPEQQKQPVR SYDAKIFSRH DPNLLKVSSF 240 LPSMEHPFVP NSFAGKRKST VGNPPPQVHP HGGSRAVHEY QFLPEQPSDT YERASRSHYY 300 DTPVEASNSR IPSLTPGPHL LHGSEDMVPG YAFEGQGLLP QSGRPQVFPA VSTDYEMNQS 360 NSNINSVPVD GQFGSSHVAG FEDPLISSET RAYHDEDASR VDRKRKHNEE AKIAKEVEAH 420 EKRIRKELEK QDILRRKREE QMRKEMERHD RERRKEEERL LRERQREEER FQREQRREHE 480 RMEKFLQKQS RRAEKQRQKE ELRKEKEMAR QKAANERATA RRIAREYMEL VEDERLELME 540 LAAQSKGLPS MLCLDSDTLQ QLDSFRGMLS QFPPEMVRLK VPLSIKPWTG SEESVGKLLM 600 VWKFLITFAD VLELSSVTLD EFIQSLHDYD SRLLGELHVA LLKSIIKDIE DVARTPSVAL 660 GVNPGGGHPQ IVEGAYSWGF NIRNWQRHLN LLTWPEILRQ FALSAGFGPQ LKKRNAEDVF 720 YRDENEGQDG QNVISALRNG SAAVRAAALM KERGYTHRRS RHRLTPGTVK FAAFHVLSLE 780 DSSGLTILEV AEKIQKSGLR DLTTSKTPEA SIAAALSRDT KLFERTAPST YCVKSPYRKD 840 PADSEPVLSA AREKIRAFQN VLSDSEAEKE VDDVRDEESD CDDDPDGDDV NIEVGDEKDP 900 LLAVKAQGVV PTATKVGEVK GDPDGLGAAL TRPISSTTSR KDIAMLSLGD SSAVGTSSVS 960 PLRASSDHPE VITGDAEDTQ IDESNQGESW VQGLAEGDYC DLSVEERLNA LVALVGVATE 1020 GNSIRAVLEE RLEAANAIKK QMWAEAQLDK RRSKEEFASK VQYNSYTSLK ADVIPENNAT 1080 ETTPTPVRNL DIDNDENAGT SNNNEILNQQ SNAGNASYER NGTGQETSAT PDNLSAQQYA 1140 YADKTRSQLK SYIGHRAEQL YVYRSLPLGQ DRRRNRYWQF STSTSPNDPG SGRIFFESRE 1200 GYWRVIDSEE VFDALVASLD TRGSREAQLH SMLQRVESTF KEGIKRKQGA AIEQSAGRYL 1260 KNGATDTMRA SYRSEFGSPS STLSSVSADS ATTYSDSFKI ELGRNDVEKI SISKRADSFL 1320 KWMWSECCDR QLTCAMKYGE KRCSALMHSC NYCYQIYLAE ERHCSSCHKT FKSIYNYSEH 1380 TSQCEEKRRT DPNWKMQIAD YSVPIGMRLL KLQLATIEVK FLLVVCFSV

Sequence ? help Back to Top

Protein Sequence Length: 1429 aa Download sequence

ASGGAAGPSG SGEKPVKRMM KTPYQLDVLE QTYLAEQYPS EAMRAELSVK IGLSDRQLQM  60
WFCHRRLKDR KPPAKRQRRD EEGPATPVPV PPPVLPLQAM PLASTDLMMS AGSPYDEPLL  120
PLAHSRRGAG RSSAVPRISA PDIGRDIGRR YYEPLPVMLP PPVAPMQFRQ AELRVITSVE  180
SQLGEPLRED GPVLGVDFDP LPPGAFGAPI VPEQQKQPVR SYDAKIFSRH DPNLLKVSSF  240
LPSMEHPFVP NSFAGKRKST VGNPPPQVHP HGGSRAVHEY QFLPEQPSDT YERASRSHYY  300
DTPVEASNSR IPSLTPGPHL LHGSEDMVPG YAFEGQGLLP QSGRPQVFPA VSTDYEMNQS  360
NSNINSVPVD GQFGSSHVAG FEDPLISSET RAYHDEDASR VDRKRKHNEE AKIAKEVEAH  420
EKRIRKELEK QDILRRKREE QMRKEMERHD RERRKEEERL LRERQREEER FQREQRREHE  480
RMEKFLQKQS RRAEKQRQKE ELRKEKEMAR QKAANERATA RRIAREYMEL VEDERLELME  540
LAAQSKGLPS MLCLDSDTLQ QLDSFRGMLS QFPPEMVRLK VPLSIKPWTG SEESVGKLLM  600
VWKFLITFAD VLELSSVTLD EFIQSLHDYD SRLLGELHVA LLKSIIKDIE DVARTPSVAL  660
GVNPGGGHPQ IVEGAYSWGF NIRNWQRHLN LLTWPEILRQ FALSAGFGPQ LKKRNAEDVF  720
YRDENEGQDG QNVISALRNG SAAVRAAALM KERGYTHRRS RHRLTPGTVK FAAFHVLSLE  780
DSSGLTILEV AEKIQKSGLR DLTTSKTPEA SIAAALSRDT KLFERTAPST YCVKSPYRKD  840
PADSEPVLSA AREKIRAFQN VLSDSEAEKE VDDVRDEESD CDDDPDGDDV NIEVGDEKDP  900
LLAVKAQGVV PTATKVGEVK GDPDGLGAAL TRPISSTTSR KDIAMLSLGD SSAVGTSSVS  960
PLRASSDHPE VITGDAEDTQ IDESNQGESW VQGLAEGDYC DLSVEERLNA LVALVGVATE  1020
GNSIRAVLEE RLEAANAIKK QMWAEAQLDK RRSKEEFASK VQYNSYTSLK ADVIPENNAT  1080
ETTPTPVRNL DIDNDENAGT SNNNEILNQQ SNAGNASYER NGTGQETSAT PDNLSAQQYA  1140
YADKTRSQLK SYIGHRAEQL YVYRSLPLGQ DRRRNRYWQF STSTSPNDPG SGRIFFESRE  1200
GYWRVIDSEE VFDALVASLD TRGSREAQLH SMLQRVESTF KEGIKRKQGA AIEQSAGRYL  1260
KNGATDTMRA SYRSEFGSPS STLSSVSADS ATTYSDSFKI ELGRNDVEKI SISKRADSFL  1320
KWMWSECCDR QLTCAMKYGE KRCSALMHSC NYCYQIYLAE ERHCSSCHKT FKSIYNYSEH  1380
TSQCEEKRRT DPNWKMQIAD YSVPIGMRLL KLQLATIEVK FLLVVCFSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG036810.2