PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG036810.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1822aa MW: 203471 Da PI: 5.1157

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG036810.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55	1.4e-17	20	74	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++ql++Le+ + ++yps+++r+eL+ k+gL++rq ++WF+ rR k++k TRIDC3AG036810.3 20 KRMMKTPYQLDVLEQTYLAEQYPSEAMRAELSVKIGLSDRQLQMWFCHRRLKDRK 74 79999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1822 aa Download sequence
PASASGGAAG PSGSGEKPVK RMMKTPYQLD VLEQTYLAEQ YPSEAMRAEL SVKIGLSDRQ 60 LQMWFCHRRL KDRKPPAKRQ RRDEEGPATP VPVPPPVLPL QAMPLASTDL MMSAGSPYDE 120 PLLPLAHSRR GAGRSSAVPR ISAPDIGRDI GRRYYEPLPV MLPPPVAPMQ FRQAELRVIT 180 SVESQLGEPL REDGPVLGVD FDPLPPGAFG APIVPEQQKQ PVRSYDAKIF SRHDPNLLKV 240 SSFLPSMEHP FVPNSFAGKR KSTVGNPPPQ VHPHGGSRAV HEYQFLPEQP SDTYERASRS 300 HYYDTPVEAS NSRIPSLTPG PHLLHGSEDM VPGYAFEGQG LLPQSGRPQV FPAVSTDYEM 360 NQSNSNINSV PVDGQFGSSH VAGFEDPLIS SETRAYHDED ASRVDRKRKH NEEAKIAKEV 420 EAHEKRIRKE LEKQDILRRK REEQMRKEME RHDRERRKEE ERLLRERQRE EERFQREQRR 480 EHERMEKFLQ KQSRRAEKQR QKEELRKEKE MARQKAANER ATARRIAREY MELVEDERLE 540 LMELAAQSKG LPSMLCLDSD TLQQLDSFRG MLSQFPPEMV RLKVPLSIKP WTGSEESVGK 600 LLMVWKFLIT FADVLELSSV TLDEFIQSLH DYDSRLLGEL HVALLKSIIK DIEDVARTPS 660 VALGVNPGGG HPQIVEGAYS WGFNIRNWQR HLNLLTWPEI LRQFALSAGF GPQLKKRNAE 720 DVFYRDENEG QDGQNVISAL RNGSAAVRAA ALMKERGYTH RRSRHRLTPG TVKFAAFHVL 780 SLEDSSGLTI LEVAEKIQKS GLRDLTTSKT PEASIAAALS RDTKLFERTA PSTYCVKSPY 840 RKDPADSEPV LSAAREKIRA FQNVLSDSEA EKEVDDVRDE ESDCDDDPDG DDVNIEVGDE 900 KDPLLAVKAQ GVVPTATKVG EVKGDPDGLG AALTRPISST TSRKDIAMLS LGDSSAVGTS 960 SVSPLRASSD HPEVITGDAE DTQIDESNQG ESWVQGLAEG DYCDLSVEER LNALVALVGV 1020 ATEGNSIRAV LEERLEAANA IKKQMWAEAQ LDKRRSKEEF ASKVQYNSYT SLKADVIPEN 1080 NATETTPTPV RNLDIDNDEN AGTSNNNEIL NQQSNAGNAS YERNGTGQET SATPDNLSAQ 1140 QYAYADKTRS QLKSYIGHRA EQLYVYRSLP LGQDRRRNRY WQFSTSTSPN DPGSGRIFFE 1200 SREGYWRVID SEEVFDALVA SLDTRGSREA QLHSMLQRVE STFKEGIKRK QGAAIEQSAG 1260 RYLKNGATDT MRASYRSEFG SPSSTLSSVS ADSATTYSDS FKIELGRNDV EKISISKRAD 1320 SFLKWMWSEC CDRQLTCAMK YGEKRCSALM HSCNYCYQIY LAEERHCSSC HKTFKSIYNY 1380 SEHTSQCEEK RRTDPNWKMQ IADYSVPIGM RLLKLQLATI EASIPSEALQ PFWSDGYRKS 1440 WGVKLHSTTS VVEIFQMLTL LEGAIRRDYL SSDFETSNEL LNNSKTEDMP SQNPSSSPGT 1500 SVLPWVPDTT AAITLRMLDL DYAVSYVQNQ KERDGGDSMK LASRYTVVKK AQDIEPLEPT 1560 GFDLYDARGP PSSGRRGRGR GSRGGSRGGR GRSRGGRIPR GISSSSRIEF MDEDAAYEKA 1620 PRKNARRGRG RGRGRGRGRR TVRPRQPLSE GRGRSIPKAH LLGSFSMLSN VKPSAVEESP 1680 RSSGAEEWGL ESRRPYIQGE GDENSSGSES DQSEDNGENG QPMDEEYEEE QVPDYSRAYS 1740 GGLRPLAHVM MDDETEDDDE DAEGDGEGDE EEYDVNHASA DVDDEMDEDD DIGDDGDDGG 1800 DGVEVNADED EGATSYSSEY SE

Sequence ? help Back to Top

Protein Sequence Length: 1822 aa Download sequence

PASASGGAAG PSGSGEKPVK RMMKTPYQLD VLEQTYLAEQ YPSEAMRAEL SVKIGLSDRQ  60
LQMWFCHRRL KDRKPPAKRQ RRDEEGPATP VPVPPPVLPL QAMPLASTDL MMSAGSPYDE  120
PLLPLAHSRR GAGRSSAVPR ISAPDIGRDI GRRYYEPLPV MLPPPVAPMQ FRQAELRVIT  180
SVESQLGEPL REDGPVLGVD FDPLPPGAFG APIVPEQQKQ PVRSYDAKIF SRHDPNLLKV  240
SSFLPSMEHP FVPNSFAGKR KSTVGNPPPQ VHPHGGSRAV HEYQFLPEQP SDTYERASRS  300
HYYDTPVEAS NSRIPSLTPG PHLLHGSEDM VPGYAFEGQG LLPQSGRPQV FPAVSTDYEM  360
NQSNSNINSV PVDGQFGSSH VAGFEDPLIS SETRAYHDED ASRVDRKRKH NEEAKIAKEV  420
EAHEKRIRKE LEKQDILRRK REEQMRKEME RHDRERRKEE ERLLRERQRE EERFQREQRR  480
EHERMEKFLQ KQSRRAEKQR QKEELRKEKE MARQKAANER ATARRIAREY MELVEDERLE  540
LMELAAQSKG LPSMLCLDSD TLQQLDSFRG MLSQFPPEMV RLKVPLSIKP WTGSEESVGK  600
LLMVWKFLIT FADVLELSSV TLDEFIQSLH DYDSRLLGEL HVALLKSIIK DIEDVARTPS  660
VALGVNPGGG HPQIVEGAYS WGFNIRNWQR HLNLLTWPEI LRQFALSAGF GPQLKKRNAE  720
DVFYRDENEG QDGQNVISAL RNGSAAVRAA ALMKERGYTH RRSRHRLTPG TVKFAAFHVL  780
SLEDSSGLTI LEVAEKIQKS GLRDLTTSKT PEASIAAALS RDTKLFERTA PSTYCVKSPY  840
RKDPADSEPV LSAAREKIRA FQNVLSDSEA EKEVDDVRDE ESDCDDDPDG DDVNIEVGDE  900
KDPLLAVKAQ GVVPTATKVG EVKGDPDGLG AALTRPISST TSRKDIAMLS LGDSSAVGTS  960
SVSPLRASSD HPEVITGDAE DTQIDESNQG ESWVQGLAEG DYCDLSVEER LNALVALVGV  1020
ATEGNSIRAV LEERLEAANA IKKQMWAEAQ LDKRRSKEEF ASKVQYNSYT SLKADVIPEN  1080
NATETTPTPV RNLDIDNDEN AGTSNNNEIL NQQSNAGNAS YERNGTGQET SATPDNLSAQ  1140
QYAYADKTRS QLKSYIGHRA EQLYVYRSLP LGQDRRRNRY WQFSTSTSPN DPGSGRIFFE  1200
SREGYWRVID SEEVFDALVA SLDTRGSREA QLHSMLQRVE STFKEGIKRK QGAAIEQSAG  1260
RYLKNGATDT MRASYRSEFG SPSSTLSSVS ADSATTYSDS FKIELGRNDV EKISISKRAD  1320
SFLKWMWSEC CDRQLTCAMK YGEKRCSALM HSCNYCYQIY LAEERHCSSC HKTFKSIYNY  1380
SEHTSQCEEK RRTDPNWKMQ IADYSVPIGM RLLKLQLATI EASIPSEALQ PFWSDGYRKS  1440
WGVKLHSTTS VVEIFQMLTL LEGAIRRDYL SSDFETSNEL LNNSKTEDMP SQNPSSSPGT  1500
SVLPWVPDTT AAITLRMLDL DYAVSYVQNQ KERDGGDSMK LASRYTVVKK AQDIEPLEPT  1560
GFDLYDARGP PSSGRRGRGR GSRGGSRGGR GRSRGGRIPR GISSSSRIEF MDEDAAYEKA  1620
PRKNARRGRG RGRGRGRGRR TVRPRQPLSE GRGRSIPKAH LLGSFSMLSN VKPSAVEESP  1680
RSSGAEEWGL ESRRPYIQGE GDENSSGSES DQSEDNGENG QPMDEEYEEE QVPDYSRAYS  1740
GGLRPLAHVM MDDETEDDDE DAEGDGEGDE EEYDVNHASA DVDDEMDEDD DIGDDGDDGG  1800
DGVEVNADED EGATSYSSEY SE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1627	1636	RGRGRGRGRG
2	1627	1637	RGRGRGRGRGR
3	1629	1638	RGRGRGRGRG
4	1629	1639	RGRGRGRGRGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG036810.3