PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG037630.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 293aa    MW: 31213.2 Da    PI: 7.4784
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG037630.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.11e-181461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg W++eEde+lv++++ +G g+W++++r  g+ R++k+c++rw +yl
  TRIDC3AG037630.4 14 RGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYL 61
                      788*******************************************97 PP
2Myb_DNA-binding54.92e-1767110146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg++++eE+ l+vd+++ lG++ W+ Ia++++ gRt++++k++w++
  TRIDC3AG037630.4  67 RGSFSQEEEALIVDLHRVLGNR-WAQIAKHLP-GRTDNEVKNFWNS 110
                       899*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MGHHSCCNKQ KVRRGLWSPE EDEKLVKYIT AHGHGCWSSV PRQAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SQEEEALIVD LHRVLGNRWA QIAKHLPGRT DNEVKNFWNS TIKKKLISQA  120
VGSLHYGNIP SSADLYYNIL DGAGQGIAAA GCASLNALDN AAQAVATQSP PSSAAWLNFT  180
SQPLLLPVHG AVPGCDLQYT VDGEFIRLCH AAANACPENG ASSLLAQEGG ADRSCLPVFA  240
EPKGAGAFAA DPGMGPVADF MDAILGSSST SAASVSSVDS FSANTGMQLH WVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.22e-76MYB family protein