PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG037720.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 260aa    MW: 28459.3 Da    PI: 6.9437
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG037720.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.65.2e-12556147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                      +++WT eE+e l ++v ++G g W+tI +          R+  ++k++w+++
  TRIDC3AG037720.1  5 KQKWTSEEEEALRRGVLKHGAGKWRTIQKDPEfspvlSSRSNIDLKDKWRNL 56
                      79***********************************9************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MGAPKQKWTS EEEEALRRGV LKHGAGKWRT IQKDPEFSPV LSSRSNIDLK DKWRNLSFSA  60
SGLGSRDKLR VPRPKAPSSS PSPSPQLLLL SAPNNVAEAS PPEDCEKSPQ DDKTPSPKLY  120
SSMILEALDE LKEPNGSEVA TICNFIEIDK SYKLTDSYAK RALAPMKDPS LKKKDSAKSS  180
KAAKGLGQLS PALDAAEAAA MKVADAEAKS HLANEHMMEV ERIGKMAEET ESLLELASEL  240
YERCSRGEAL TILQVAHREF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.18e-35MYB_related family protein