PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG037780.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 374aa MW: 38444.4 Da PI: 7.5352

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG037780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.4	1.9e-06	264	304	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+r+ +++ L++l+P K++ a++L +A Y+k L TRIDC3AG037780.1 264 ARLRRERVSDRLRVLQKLVPGG-----SKMDTASMLDEAASYLKFL 304 599***************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
DDAYLPRPAS QLSCGRFDLD DAFLGQLQCD FGGGGQVSSS YGAAVGGAAG DSTNNGPLGF 60 FGSGVDVFSS VVDGASAHDG LLDSAFAFSS VLPCGGEGDP GAVSNGAMFS GYSGTTVCNI 120 SSGESNNYSG GGGGHDVTEV ASPTSTISPT TTSHPTITSA QQVLHVSRKL PADDCPAAAT 180 VHAGTKRKAP TTTATSITFG QDTNAGAAGG YKPDMEAMAQ VKEMIYRAAA MRPVNLVTEP 240 PAQGSSKPRR KNVRISSDPQ TVAARLRRER VSDRLRVLQK LVPGGSKMDT ASMLDEAASY 300 LKFLKSQVQA LETLGTTSSS TGASAAAAAS TGRLQLHSQQ HYYSNNPGFL GFARNNNNIS 360 SVFRNPNGNS ARLL

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

DDAYLPRPAS QLSCGRFDLD DAFLGQLQCD FGGGGQVSSS YGAAVGGAAG DSTNNGPLGF  60
FGSGVDVFSS VVDGASAHDG LLDSAFAFSS VLPCGGEGDP GAVSNGAMFS GYSGTTVCNI  120
SSGESNNYSG GGGGHDVTEV ASPTSTISPT TTSHPTITSA QQVLHVSRKL PADDCPAAAT  180
VHAGTKRKAP TTTATSITFG QDTNAGAAGG YKPDMEAMAQ VKEMIYRAAA MRPVNLVTEP  240
PAQGSSKPRR KNVRISSDPQ TVAARLRRER VSDRLRVLQK LVPGGSKMDT ASMLDEAASY  300
LKFLKSQVQA LETLGTTSSS TGASAAAAAS TGRLQLHSQQ HYYSNNPGFL GFARNNNNIS  360
SVFRNPNGNS ARLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	252	KPRRKN
2	265	270	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	7e-34	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG037780.1