PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG037890.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 459aa MW: 49118.5 Da PI: 8.6264

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG037890.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.5	2.3e-13	313	359	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++Pk + K++Ka+ L A+ YI++L+ TRIDC3AG037890.2 313 NHVEAERQRREKLNQRFYALRAVVPKiS------KMDKASLLSDAIAYIQELE 359 799*********************66......**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MSWSDTDAAL FAAVLGHDAA RHLATTPPHL DGPASSSPEL QTRLYDLVER GGAWTYGIYW 60 QESRAGAGVL GWGDGHCRDG PAEQAGATDR SLARKRALLR LHALYGGGDE DGADYALRLD 120 RVTGVEMYFL ASMYFSFRED AGGPGRALTS GHHAWAAVDP HLPAAPGWYV RASLAQSAGL 180 RTVVFLPCKG GVLELGSAVA MRENPEVLRA IQSVFHVEAV APDDRMRIFG KDVSRSPPLP 240 PVQTTGSDAS WALRLGGQAK QEAAAAKPKP QQEPPKTISF SNAVGAQKQA GGEDRRPRKR 300 GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPKIS KMDKASLLSD AIAYIQELEE 360 RLRGGAPARA EAGSSVEVKA MQDEVVLRVS TPLDAHPISG PLSAMRDSQL SVVASSMAVA 420 DDTVTHTLVV RSAGPERLTA EAVLAAISRG VIMSATPSP

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MSWSDTDAAL FAAVLGHDAA RHLATTPPHL DGPASSSPEL QTRLYDLVER GGAWTYGIYW  60
QESRAGAGVL GWGDGHCRDG PAEQAGATDR SLARKRALLR LHALYGGGDE DGADYALRLD  120
RVTGVEMYFL ASMYFSFRED AGGPGRALTS GHHAWAAVDP HLPAAPGWYV RASLAQSAGL  180
RTVVFLPCKG GVLELGSAVA MRENPEVLRA IQSVFHVEAV APDDRMRIFG KDVSRSPPLP  240
PVQTTGSDAS WALRLGGQAK QEAAAAKPKP QQEPPKTISF SNAVGAQKQA GGEDRRPRKR  300
GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPKIS KMDKASLLSD AIAYIQELEE  360
RLRGGAPARA EAGSSVEVKA MQDEVVLRVS TPLDAHPISG PLSAMRDSQL SVVASSMAVA  420
DDTVTHTLVV RSAGPERLTA EAVLAAISRG VIMSATPSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	303	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	2e-74	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG037890.2