PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG040030.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 216aa    MW: 24383.3 Da    PI: 11.4681
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG040030.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP44.91.9e-1465118471
           E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       ++Lr +++    ++ek+e+ g++t+ne           n+rRR+YD++NVL al++i+k ek+eirw+g
  TRIDC3AG040030.2  65 WGLREYSKI---VCEKVEAkGRTTYNE-----------NIRRRVYDAFNVLIALRVIAK-EKKEIRWMG 118
                       566666666...677766666666663...........68*******************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MAPPRGGAAA AAPAALDLTG VHILEASSVP PLPERGGNAV QRKGAVDPDK DRKKEKAAAP  60
RITGWGLREY SKIVCEKVEA KGRTTYNENI RRRVYDAFNV LIALRVIAKE KKEIRWMGLS  120
NYRKFVKNSS TRLGTRRHSS RKSKNSLMIS KTSSYVTKHW KAQHRMLMAS AFHSYWSRHL  180
GKQGWKLRFQ MTQSLPISSS MVHHSHCMMI SQSLRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.18e-23E2F/DP family protein