PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG040840.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 381aa    MW: 42405.4 Da    PI: 12.7113
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG040840.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.39.1e-18254288135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC3AG040840.2 254 CLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRL 288
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
CVRPPLSRRP WRPRRPTTTP ATRRAPTSSS STTSSRCRAT TRRRRRKGWA TRRSCRPTPP  60
PPPQSSSSRR PGSGTRRPTR PPSRPSTAAA TPSPASPTAT SPAASASRTI SWRSWNGCPT  120
TWARARRASP RRTYTSCSSS LASPPAASPR RTGRLLRRPP LPRRSPACSC RRAPSPPRPV  180
ASAPALRRAT GRPACSFSRR PRPPRRPRRP WPSRRRSLAS QPRRSMSRSL PSRPRRRRCP  240
PSGVTAAANE GRRCLHCETD KTPQWRTGPM GPKTLCNACG VRYKSGRLVP EYRPAASPTF  300
VTSRHSNSHR KVLELRRQRE MHHHHQPSQL QQHAVAGGVG RIMHMESHLL FDGPAAPPIL  360
GGGDDFLIHH RLGTADYRQQ L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.19e-47GATA family protein