PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG041600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 237aa    MW: 26138.6 Da    PI: 7.4556
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG041600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind99.53.3e-31201122103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k++++++d++++ ++ w   +n+f+vld+  f++ +Lp+yFkh+nfaSFvRQLn+YgF+kv+ +          weF+h+sF +g+ +ll
  TRIDC3AG041600.1  20 FVAKTFHMVSDPATDAVVCWGGASNTFLVLDPAAFSDFLLPSYFKHRNFASFVRQLNTYGFRKVDPDV---------WEFAHESFLRGQAKLL 103
                       9********************999****************************************9877.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                         i rkk++
  TRIDC3AG041600.1 104 PLIVRKKKR 112
                       *****9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
SMGSECKGHQ PQDDGGVAPF VAKTFHMVSD PATDAVVCWG GASNTFLVLD PAAFSDFLLP  60
SYFKHRNFAS FVRQLNTYGF RKVDPDVWEF AHESFLRGQA KLLPLIVRKK KRAGRELCEE  120
EEEVRGTIQA VQRLRDERRG MEEELQDMDR RLCAAENRPG QMMAFLGKLA DDPGVVLRAM  180
VAKKEELAAA GAGGKDSSPD KRRRIGADAG RGADAADQAA QSRAVPFPFS NLGQVFY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1201205KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.12e-59HSF family protein