PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG042160.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 320aa    MW: 35911.1 Da    PI: 8.0205
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG042160.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.12.8e-1762157299
                       EEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                       fkvl     +++ rl +p++f++ +      g++ ++++ +l+ ++g++W v+l  +k ++ ++lt+GW +Fv +n L+e +f++F++d++++
  TRIDC3AG042160.3  62 FKVL--VGDFAR-RLEIPRDFLSYIpevglRGSNISPVQAMLKRSEGKTWVVEL--EKVDCCVFLTTGWTKFVVDNTLREYEFLLFRHDRKMD 149
                       5555..344444.69*******555***9955667999****************..*******************************999999 PP

                       E..EEEEE-S CS
                B3  90 felvvkvfrk 99 
                       f  +v+vf +
  TRIDC3AG042160.3 150 F--MVSVFGR 157
                       9..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
AFRLRQGRRS GGDSAEVTLH PSHQPTTPPL APSVARGGMS MNGDRSAGSA MEEDEEGRPR  60
FFKVLVGDFA RRLEIPRDFL SYIPEVGLRG SNISPVQAML KRSEGKTWVV ELEKVDCCVF  120
LTTGWTKFVV DNTLREYEFL LFRHDRKMDF MVSVFGRNAC EKAVRSSGSA AQATESLERK  180
LPCDMFPTCK RGHSGDELTK ITNNLRQSHS LVMIPDQSDT KGNGHISPQS FADIHRHEVD  240
GLKDELKIYL LLKVPMDDDK AKVIAEVMSR LHVDRVTVDL FCAALCLYKW DSDAAAEVLN  300
TCRGKPQIPN QFLKQKLVLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.16e-14B3 family protein