PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG042670.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 143aa    MW: 15920.2 Da    PI: 9.3256
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG042670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind77.62e-241379268
                      HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---S CS
      HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkde 68
                      Fl+k+ye++++++++ ++ w+ +g+sfvvl + +f +++LpkyFkh+nf+SFvRQLn+Y  + ++++
  TRIDC3AG042670.1 13 FLTKTYEMVDEPATDAVVAWTPSGTSFVVLSQADFCRDLLPKYFKHNNFSSFVRQLNTYVRRTTSHP 79
                      9**********************************************************77776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MEGSGGSSSL PPFLTKTYEM VDEPATDAVV AWTPSGTSFV VLSQADFCRD LLPKYFKHNN  60
FSSFVRQLNT YVRRTTSHPP SPSLLRPISV PPRELGPGRN AWRFLVLTCE AMSQGGCVGY  120
RGIRFSWANN LRFRTSACDL LLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17750.16e-28HSF family protein