PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG043340.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 272aa MW: 28578.1 Da PI: 4.6259

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG043340.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	29.4	2.7e-09	1	73	41	89
TCP 41 fdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas.nsssg.......................k 89 +d++sk+++WL+++ak+ai el++ + +++ + +++++ s++ +s+ + + TRIDC3AG043340.1 1 YDRPSKAVDWLIRNAKAAIEELPDRPEEAPPTAePEAAEQMSEQvTST-SsygfsnpggtamtnsflqhslgaD 73 69***********************44444333212222222221111.1234555556555433333333331 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
YDRPSKAVDW LIRNAKAAIE ELPDRPEEAP PTAEPEAAEQ MSEQVTSTSS YGFSNPGGTA 60 MTNSFLQHSL GADQVSDSVK SLFPSSSTAT AGGHDEYRGS PPDLLSRTTS SQPQELCLTL 120 QSNQHNMFSH VSPNHHGIIS GAGVPGWPDH GQRMPSSWHA SDNDAGEGRG AGGNGDSYMF 180 AGILARQGLD QGQLFSSNGE TLQSSAGWAA SARAWLDPLA GIHQPSAMSG QIGFSHLVGG 240 GGGGFMGFLA PAAQRLQLQG EEEEGSDVMR RD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	5e-13	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG043340.1