PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG043920.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 216aa MW: 23300.7 Da PI: 6.0594

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG043920.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.5	4.1e-22	76	131	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++t+eq++++e++F+++++p++++r++L+k+lgL+ rqVk+WFqNrR++ k TRIDC3AG043920.5 76 RKSYHRHTAEQVRVMEAVFKESPHPDEKQRQQLSKQLGLSPRQVKFWFQNRRTQIK 131 788999**********************************************9877 PP
2	HD-ZIP_I/II	66	8.8e-22	80	158	4	82
HD-ZIP_I/II 4 rrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLek 82 +r ++eqv+++E F+e+ + + +++++l+++Lgl+prqv+ WFqnrR +k+ q ++ + Lk+++++l++en+++++ TRIDC3AG043920.5 80 HRHTAEQVRVMEAVFKESPHPDEKQRQQLSKQLGLSPRQVKFWFQNRRTQIKATQERHENSLLKSELENLQKENRAMRQ 158 5889***********************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MIELWVQAGA FARNAPSGDE VEEGEEGSGG IIGGPPGEEV EISSADTGPA GSQSGDGSGE 60 EEEGHADGGK RKKRSRKSYH RHTAEQVRVM EAVFKESPHP DEKQRQQLSK QLGLSPRQVK 120 FWFQNRRTQI KATQERHENS LLKSELENLQ KENRAMRQLA KGPSRCPSCG AAAASTDGFD 180 AAAANQEQLL QLENAKLRAE VEKLRGALGT AAADGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79840.1	4e-33	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG043920.5