PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG043920.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 230aa MW: 24635.2 Da PI: 7.0652

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG043920.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.4	4.6e-22	90	145	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++t+eq++++e++F+++++p++++r++L+k+lgL+ rqVk+WFqNrR++ k TRIDC3AG043920.7 90 RKSYHRHTAEQVRVMEAVFKESPHPDEKQRQQLSKQLGLSPRQVKFWFQNRRTQIK 145 788999**********************************************9877 PP
2	HD-ZIP_I/II	65.8	1e-21	94	172	4	82
HD-ZIP_I/II 4 rrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLek 82 +r ++eqv+++E F+e+ + + +++++l+++Lgl+prqv+ WFqnrR +k+ q ++ + Lk+++++l++en+++++ TRIDC3AG043920.7 94 HRHTAEQVRVMEAVFKESPHPDEKQRQQLSKQLGLSPRQVKFWFQNRRTQIKATQERHENSLLKSELENLQKENRAMRQ 172 5889***********************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MGSGRPRTKD FFAAPTLSLS LAGAFARNAP SGDEVEEGEE GSGGIIGGPP GEEVEISSAD 60 TGPAGSQSGD GSGEEEEGHA DGGKRKKRSR KSYHRHTAEQ VRVMEAVFKE SPHPDEKQRQ 120 QLSKQLGLSP RQVKFWFQNR RTQIKATQER HENSLLKSEL ENLQKENRAM RQLAKGPSRC 180 PSCGAAAAST DGFDAAAANQ EQLLQLENAK LRAEVEKLRG ALGTAAADGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79840.1	4e-33	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG043920.7